Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MIR4683-201ENST00000579659 81 ntBASIC18.15■□□□□ 0.5
CHGBP05060 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.15■□□□□ 0.5
CHGBP05060 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.15■□□□□ 0.5
CHGBP05060 OR10B1P-201ENST00000601666 907 ntBASIC18.15■□□□□ 0.5
CHGBP05060 AL359881.2-201ENST00000602973 570 ntBASIC18.15■□□□□ 0.5
CHGBP05060 AC073413.1-201ENST00000603927 732 ntBASIC18.15■□□□□ 0.5
CHGBP05060 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CHGBP05060 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CHGBP05060 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHGBP05060 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.15■□□□□ 0.5
CHGBP05060 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.15■□□□□ 0.5
CHGBP05060 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.15■□□□□ 0.5
CHGBP05060 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHGBP05060 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHGBP05060 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.14■□□□□ 0.5
CHGBP05060 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CHGBP05060 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.14■□□□□ 0.5
CHGBP05060 FGD5P1-202ENST00000614866 2498 ntBASIC18.14■□□□□ 0.5
CHGBP05060 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHGBP05060 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.14■□□□□ 0.49
CHGBP05060 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 REXO1L6P-201ENST00000603433 1515 ntBASIC18.14■□□□□ 0.49
CHGBP05060 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.14■□□□□ 0.49
CHGBP05060 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHGBP05060 TPM3P8-201ENST00000330554 643 ntBASIC18.14■□□□□ 0.49
CHGBP05060 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.14■□□□□ 0.49
CHGBP05060 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CHGBP05060 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.14■□□□□ 0.49
CHGBP05060 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHGBP05060 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.14■□□□□ 0.49
CHGBP05060 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.14■□□□□ 0.49
CHGBP05060 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.14■□□□□ 0.49
CHGBP05060 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.14■□□□□ 0.49
CHGBP05060 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHGBP05060 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.14■□□□□ 0.49
CHGBP05060 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.14■□□□□ 0.49
CHGBP05060 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHGBP05060 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHGBP05060 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.14■□□□□ 0.49
CHGBP05060 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.14■□□□□ 0.49
CHGBP05060 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CHGBP05060 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.13■□□□□ 0.49
CHGBP05060 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CHGBP05060 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
CHGBP05060 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.13■□□□□ 0.49
CHGBP05060 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 MESTP3-201ENST00000503460 968 ntBASIC18.13■□□□□ 0.49
CHGBP05060 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.13■□□□□ 0.49
CHGBP05060 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.13■□□□□ 0.49
CHGBP05060 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHGBP05060 C2orf69P2-201ENST00000562032 1123 ntBASIC18.13■□□□□ 0.49
CHGBP05060 AP006547.1-201ENST00000563435 692 ntBASIC18.13■□□□□ 0.49
CHGBP05060 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.13■□□□□ 0.49
CHGBP05060 MIR4741-201ENST00000579822 90 ntBASIC18.13■□□□□ 0.49
CHGBP05060 AC008687.7-202ENST00000637404 953 ntBASIC18.13■□□□□ 0.49
CHGBP05060 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.13■□□□□ 0.49
CHGBP05060 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CHGBP05060 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHGBP05060 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHGBP05060 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHGBP05060 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.12■□□□□ 0.49
CHGBP05060 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms