Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 AP001002.3-201ENST00000623482 206 ntBASIC16.97■□□□□ 0.31
GGPS1O95749 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.97■□□□□ 0.31
GGPS1O95749 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 AC023157.3-201ENST00000619086 2088 ntBASIC16.97■□□□□ 0.31
GGPS1O95749 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GGPS1O95749 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.96■□□□□ 0.31
GGPS1O95749 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.96■□□□□ 0.31
GGPS1O95749 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.96■□□□□ 0.31
GGPS1O95749 AL136309.1-201ENST00000403917 691 ntBASIC16.96■□□□□ 0.31
GGPS1O95749 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.96■□□□□ 0.31
GGPS1O95749 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.96■□□□□ 0.31
GGPS1O95749 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.96■□□□□ 0.31
GGPS1O95749 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.96■□□□□ 0.31
GGPS1O95749 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.96■□□□□ 0.31
GGPS1O95749 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.96■□□□□ 0.31
GGPS1O95749 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.96■□□□□ 0.31
GGPS1O95749 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.96■□□□□ 0.31
GGPS1O95749 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.96■□□□□ 0.31
GGPS1O95749 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
GGPS1O95749 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GGPS1O95749 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.96■□□□□ 0.3
GGPS1O95749 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GGPS1O95749 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
GGPS1O95749 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.96■□□□□ 0.3
GGPS1O95749 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.96■□□□□ 0.3
GGPS1O95749 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.96■□□□□ 0.3
GGPS1O95749 AC099063.4-201ENST00000641099 1602 ntBASIC16.96■□□□□ 0.3
GGPS1O95749 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
GGPS1O95749 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.95■□□□□ 0.3
GGPS1O95749 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.95■□□□□ 0.3
GGPS1O95749 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 AC004945.1-201ENST00000416738 983 ntBASIC16.95■□□□□ 0.3
GGPS1O95749 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GGPS1O95749 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.95■□□□□ 0.3
GGPS1O95749 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.95■□□□□ 0.3
GGPS1O95749 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.95■□□□□ 0.3
GGPS1O95749 AC091804.1-201ENST00000486888 567 ntBASIC16.95■□□□□ 0.3
GGPS1O95749 AC100850.1-201ENST00000506768 649 ntBASIC16.95■□□□□ 0.3
GGPS1O95749 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.95■□□□□ 0.3
GGPS1O95749 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 AC244452.3-201ENST00000636814 210 ntBASIC16.95■□□□□ 0.3
GGPS1O95749 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.95■□□□□ 0.3
GGPS1O95749 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.95■□□□□ 0.3
GGPS1O95749 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms