Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.76□□□□□ -0.37
SIX6O95475 AL009183.1-201ENST00000603760 355 ntBASIC12.76□□□□□ -0.37
SIX6O95475 AL355877.3-201ENST00000622820 899 ntBASIC12.76□□□□□ -0.37
SIX6O95475 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.76□□□□□ -0.37
SIX6O95475 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SIX6O95475 AC114271.1-201ENST00000612689 2813 ntBASIC12.76□□□□□ -0.37
SIX6O95475 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SIX6O95475 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.76□□□□□ -0.37
SIX6O95475 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.76□□□□□ -0.37
SIX6O95475 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SIX6O95475 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SIX6O95475 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SIX6O95475 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 KRT18P27-201ENST00000427733 1299 ntBASIC12.75□□□□□ -0.37
SIX6O95475 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 TMEM198B-204ENST00000484016 896 ntBASIC12.75□□□□□ -0.37
SIX6O95475 CXCL1P1-201ENST00000502804 216 ntBASIC12.75□□□□□ -0.37
SIX6O95475 AC136632.2-201ENST00000512891 861 ntBASIC12.75□□□□□ -0.37
SIX6O95475 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SIX6O95475 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.75□□□□□ -0.37
SIX6O95475 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
SIX6O95475 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 AC012617.1-204ENST00000586340 2305 ntBASIC12.75□□□□□ -0.37
SIX6O95475 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.75□□□□□ -0.37
SIX6O95475 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.75□□□□□ -0.37
SIX6O95475 AC004790.2-201ENST00000623588 572 ntBASIC12.75□□□□□ -0.37
SIX6O95475 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.75□□□□□ -0.37
SIX6O95475 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.75□□□□□ -0.37
SIX6O95475 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
SIX6O95475 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SIX6O95475 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SIX6O95475 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SIX6O95475 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SIX6O95475 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.74□□□□□ -0.37
SIX6O95475 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SIX6O95475 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SIX6O95475 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.74□□□□□ -0.37
SIX6O95475 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.74□□□□□ -0.37
SIX6O95475 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.74□□□□□ -0.37
SIX6O95475 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.74□□□□□ -0.37
SIX6O95475 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SIX6O95475 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms