Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RFPL1O75677 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.26■□□□□ 0.03
RFPL1O75677 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.26■□□□□ 0.03
RFPL1O75677 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.26■□□□□ 0.03
RFPL1O75677 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.26■□□□□ 0.03
RFPL1O75677 AL353779.1-201ENST00000434793 351 ntBASIC15.26■□□□□ 0.03
RFPL1O75677 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.26■□□□□ 0.03
RFPL1O75677 GPR53P-205ENST00000457298 1084 ntBASIC15.26■□□□□ 0.03
RFPL1O75677 SERBP1P3-201ENST00000459980 809 ntBASIC15.26■□□□□ 0.03
RFPL1O75677 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.26■□□□□ 0.03
RFPL1O75677 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 AC008738.7-201ENST00000609744 511 ntBASIC15.26■□□□□ 0.03
RFPL1O75677 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
RFPL1O75677 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RFPL1O75677 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 AC152010.1-201ENST00000415779 2006 ntBASIC15.26■□□□□ 0.03
RFPL1O75677 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RFPL1O75677 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.25■□□□□ 0.03
RFPL1O75677 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 AC098614.1-201ENST00000368528 745 ntBASIC15.25■□□□□ 0.03
RFPL1O75677 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.25■□□□□ 0.03
RFPL1O75677 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RFPL1O75677 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.25■□□□□ 0.03
RFPL1O75677 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.25■□□□□ 0.03
RFPL1O75677 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RFPL1O75677 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFPL1O75677 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL1O75677 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.24■□□□□ 0.03
RFPL1O75677 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RFPL1O75677 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.24■□□□□ 0.03
RFPL1O75677 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.24■□□□□ 0.03
RFPL1O75677 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RFPL1O75677 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.24■□□□□ 0.03
RFPL1O75677 AC009407.1-201ENST00000568958 598 ntBASIC15.24■□□□□ 0.03
RFPL1O75677 SAMD11P1-201ENST00000571429 661 ntBASIC15.24■□□□□ 0.03
RFPL1O75677 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.24■□□□□ 0.03
RFPL1O75677 AL844908.2-201ENST00000609461 460 ntBASIC15.24■□□□□ 0.03
RFPL1O75677 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.24■□□□□ 0.03
RFPL1O75677 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.24■□□□□ 0.03
RFPL1O75677 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms