Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GPC4O75487 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 LINC00528-201ENST00000600723 2160 ntBASIC15.29■□□□□ 0.04
GPC4O75487 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
GPC4O75487 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 TPRX2P-201ENST00000535362 881 ntBASIC15.29■□□□□ 0.04
GPC4O75487 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
GPC4O75487 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 RN7SL204P-201ENST00000582831 262 ntBASIC15.29■□□□□ 0.04
GPC4O75487 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.29■□□□□ 0.04
GPC4O75487 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.29■□□□□ 0.04
GPC4O75487 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GPC4O75487 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
GPC4O75487 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GPC4O75487 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
GPC4O75487 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GPC4O75487 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GPC4O75487 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC4O75487 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 CLK3P2-201ENST00000427566 1453 ntBASIC15.28■□□□□ 0.04
GPC4O75487 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GPC4O75487 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC4O75487 LINC00552-201ENST00000625151 2579 ntBASIC15.28■□□□□ 0.04
GPC4O75487 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GPC4O75487 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC4O75487 MEP1AP4-201ENST00000423244 1087 ntBASIC15.28■□□□□ 0.04
GPC4O75487 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC4O75487 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.28■□□□□ 0.04
GPC4O75487 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.28■□□□□ 0.04
GPC4O75487 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.28■□□□□ 0.04
GPC4O75487 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.28■□□□□ 0.04
GPC4O75487 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
GPC4O75487 LINC02560-201ENST00000596379 459 ntBASIC15.28■□□□□ 0.04
GPC4O75487 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 AC008761.3-201ENST00000624803 892 ntBASIC15.28■□□□□ 0.04
GPC4O75487 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC4O75487 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms