Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
CHMP2AO43633 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 AC026954.1-201ENST00000429771 1293 ntBASIC17.06■□□□□ 0.32
CHMP2AO43633 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 AC026434.2-201ENST00000506094 1078 ntBASIC17.06■□□□□ 0.32
CHMP2AO43633 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.06■□□□□ 0.32
CHMP2AO43633 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 AC004466.1-201ENST00000599515 1080 ntBASIC17.06■□□□□ 0.32
CHMP2AO43633 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHMP2AO43633 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.06■□□□□ 0.32
CHMP2AO43633 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CHMP2AO43633 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP2AO43633 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.05■□□□□ 0.32
CHMP2AO43633 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 LILRP1-201ENST00000444199 1370 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 WASH3P-207ENST00000560956 1394 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHMP2AO43633 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 TPM3P8-201ENST00000330554 643 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP2AO43633 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.05■□□□□ 0.32
CHMP2AO43633 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP2AO43633 CNN2P8-201ENST00000421872 913 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP2AO43633 AC007274.1-201ENST00000439805 662 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.05■□□□□ 0.32
CHMP2AO43633 RNA5SP486-201ENST00000515961 83 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CHMP2AO43633 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.05■□□□□ 0.32
CHMP2AO43633 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 ENPP7P14-201ENST00000621765 1040 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 RHOXF1P1-202ENST00000635473 501 ntBASIC17.05■□□□□ 0.32
CHMP2AO43633 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP2AO43633 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP2AO43633 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP2AO43633 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms