Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNRC18O15417 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNRC18O15417 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC15.77■□□□□ 0.12
TNRC18O15417 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.77■□□□□ 0.12
TNRC18O15417 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNRC18O15417 RPL10P8-201ENST00000522888 313 ntBASIC15.77■□□□□ 0.12
TNRC18O15417 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.77■□□□□ 0.12
TNRC18O15417 RN7SL202P-201ENST00000584410 262 ntBASIC15.77■□□□□ 0.12
TNRC18O15417 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TNRC18O15417 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC15.77■□□□□ 0.12
TNRC18O15417 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC15.77■□□□□ 0.12
TNRC18O15417 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNRC18O15417 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNRC18O15417 ME2P1-201ENST00000426028 1970 ntBASIC15.77■□□□□ 0.12
TNRC18O15417 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNRC18O15417 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.77■□□□□ 0.11
TNRC18O15417 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TNRC18O15417 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNRC18O15417 GUCY2EP-203ENST00000531117 1918 ntBASIC15.77■□□□□ 0.11
TNRC18O15417 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TNRC18O15417 AL591499.1-201ENST00000307155 1153 ntBASIC15.77■□□□□ 0.11
TNRC18O15417 POP5-201ENST00000341039 913 ntTSL 2 BASIC15.77■□□□□ 0.11
TNRC18O15417 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.77■□□□□ 0.11
TNRC18O15417 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TNRC18O15417 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC15.77■□□□□ 0.11
TNRC18O15417 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC15.77■□□□□ 0.11
TNRC18O15417 RPS5-205ENST00000598495 800 ntTSL 3 BASIC15.77■□□□□ 0.11
TNRC18O15417 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
TNRC18O15417 AC113385.2-201ENST00000614465 762 ntBASIC15.77■□□□□ 0.11
TNRC18O15417 AC010335.3-201ENST00000623767 531 ntBASIC15.77■□□□□ 0.11
TNRC18O15417 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNRC18O15417 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TNRC18O15417 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNRC18O15417 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TNRC18O15417 RPSAP12-201ENST00000435879 888 ntBASIC15.76■□□□□ 0.11
TNRC18O15417 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
TNRC18O15417 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TNRC18O15417 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.76■□□□□ 0.11
TNRC18O15417 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.76■□□□□ 0.11
TNRC18O15417 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.76■□□□□ 0.11
TNRC18O15417 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
TNRC18O15417 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.76■□□□□ 0.11
TNRC18O15417 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TNRC18O15417 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC15.76■□□□□ 0.11
TNRC18O15417 AL136084.1-201ENST00000449172 318 ntBASIC15.76■□□□□ 0.11
TNRC18O15417 RN7SL487P-201ENST00000468140 344 ntBASIC15.76■□□□□ 0.11
TNRC18O15417 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC15.76■□□□□ 0.11
TNRC18O15417 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TNRC18O15417 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC15.76■□□□□ 0.11
TNRC18O15417 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
TNRC18O15417 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TNRC18O15417 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNRC18O15417 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC15.75■□□□□ 0.11
TNRC18O15417 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC15.75■□□□□ 0.11
TNRC18O15417 YY1P2-201ENST00000438766 948 ntBASIC15.75■□□□□ 0.11
TNRC18O15417 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC15.75■□□□□ 0.11
TNRC18O15417 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.75■□□□□ 0.11
TNRC18O15417 AL136982.5-201ENST00000605222 294 ntBASIC15.75■□□□□ 0.11
TNRC18O15417 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.75■□□□□ 0.11
TNRC18O15417 AC097474.1-201ENST00000506481 1371 ntBASIC15.75■□□□□ 0.11
TNRC18O15417 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.75■□□□□ 0.11
TNRC18O15417 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TNRC18O15417 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.75■□□□□ 0.11
TNRC18O15417 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
TNRC18O15417 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNRC18O15417 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
TNRC18O15417 DNM1P46-202ENST00000415963 882 ntBASIC15.75■□□□□ 0.11
TNRC18O15417 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms