Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXN3O00409 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
FOXN3O00409 AP001267.2-201ENST00000532619 2086 ntBASIC16.23■□□□□ 0.19
FOXN3O00409 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXN3O00409 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
FOXN3O00409 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.23■□□□□ 0.19
FOXN3O00409 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXN3O00409 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXN3O00409 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
FOXN3O00409 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXN3O00409 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
FOXN3O00409 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
FOXN3O00409 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 AC114812.1-204ENST00000449669 728 ntBASIC16.23■□□□□ 0.19
FOXN3O00409 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.23■□□□□ 0.19
FOXN3O00409 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
FOXN3O00409 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
FOXN3O00409 MIR4745-201ENST00000577608 62 ntBASIC16.23■□□□□ 0.19
FOXN3O00409 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.23■□□□□ 0.19
FOXN3O00409 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
FOXN3O00409 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXN3O00409 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 AC005089.1-201ENST00000619486 2241 ntBASIC16.23■□□□□ 0.19
FOXN3O00409 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
FOXN3O00409 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
FOXN3O00409 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 AC018665.1-201ENST00000622927 1362 ntBASIC16.23■□□□□ 0.19
FOXN3O00409 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXN3O00409 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
FOXN3O00409 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXN3O00409 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FOXN3O00409 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXN3O00409 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.22■□□□□ 0.19
FOXN3O00409 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXN3O00409 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 PIN1P1-201ENST00000412108 996 ntBASIC16.22■□□□□ 0.19
FOXN3O00409 KLF2P2-201ENST00000416807 1039 ntBASIC16.22■□□□□ 0.19
FOXN3O00409 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXN3O00409 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXN3O00409 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXN3O00409 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXN3O00409 WFDC1-204ENST00000613603 549 ntBASIC16.22■□□□□ 0.19
FOXN3O00409 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXN3O00409 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXN3O00409 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXN3O00409 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXN3O00409 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FOXN3O00409 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXN3O00409 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.21■□□□□ 0.19
FOXN3O00409 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXN3O00409 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
FOXN3O00409 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXN3O00409 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXN3O00409 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FOXN3O00409 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXN3O00409 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
FOXN3O00409 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FOXN3O00409 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXN3O00409 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms