Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHISA3A0PJX4 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 AC020910.6-201ENST00000623084 1459 ntBASIC13.23□□□□□ -0.29
SHISA3A0PJX4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 KRT8P12-202ENST00000472924 1397 ntBASIC13.23□□□□□ -0.29
SHISA3A0PJX4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 AL121723.1-201ENST00000445194 1519 ntBASIC13.23□□□□□ -0.29
SHISA3A0PJX4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.23□□□□□ -0.29
SHISA3A0PJX4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SHISA3A0PJX4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 HLA-A-201ENST00000376802 1334 ntBASIC13.22□□□□□ -0.29
SHISA3A0PJX4 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 AL353705.2-201ENST00000428243 662 ntBASIC13.22□□□□□ -0.29
SHISA3A0PJX4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms