Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 AL591122.2-201ENST00000624125 1853 ntBASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC074338.1-201ENST00000416825 156 ntBASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC093909.1-201ENST00000504731 1122 ntBASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC243562.1-201ENST00000560672 389 ntBASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC106730.1-201ENST00000566722 1090 ntBASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AC074044.1-201ENST00000609673 707 ntBASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 AL360270.3-201ENST00000609118 1348 ntBASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.37□□□□□ -0.27
TRDV1A0A1B0GX56 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 AC020910.6-201ENST00000623084 1459 ntBASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 AL356585.2-201ENST00000625078 2396 ntBASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 SPCS2P4-201ENST00000436160 681 ntBASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRDV1A0A1B0GX56 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms