Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 CYMP-203ENST00000474680 1263 ntBASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 RPL13AP25-201ENST00000484130 612 ntBASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 GAPDHP40-201ENST00000505218 1006 ntBASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 AC097376.2-205ENST00000610159 5334 ntBASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 SPDYE19P-201ENST00000338590 713 ntBASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 INGX-202ENST00000489074 768 ntBASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 AC041040.2-201ENST00000622926 2899 ntBASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA11Q9Y5H2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 DRD5P1-201ENST00000456605 1438 ntBASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA11Q9Y5H2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC023310.3-201ENST00000557027 670 ntBASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC100756.1-201ENST00000562736 682 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms