Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 AC079776.1-201ENST00000401540 1152 ntBASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 KRT43P-201ENST00000434019 910 ntBASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 RAB43P1-201ENST00000561790 589 ntBASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 DUX4L47-201ENST00000566374 394 ntBASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 AC244669.2-201ENST00000612320 853 ntBASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 TNRC18P2-201ENST00000417666 2714 ntBASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 AC007551.1-201ENST00000457394 519 ntBASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 AL512343.1-201ENST00000605837 169 ntBASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 AJ011931.1-201ENST00000618749 2492 ntBASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGC4Q9Y5F7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PCDHGC4Q9Y5F7 PCDHA3-202ENST00000532566 4594 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms