Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 OR10B1P-201ENST00000601666 907 ntBASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 MIR6869-201ENST00000619434 62 ntBASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 KRT8P44-201ENST00000441609 1350 ntBASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00588Q9Y4M8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AC126365.1-201ENST00000578585 1514 ntBASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 CLUHP2-201ENST00000426660 1303 ntBASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 BTBD6P1-201ENST00000412176 1267 ntBASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AC108725.1-201ENST00000495472 409 ntBASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 EEF1DP1-201ENST00000585891 896 ntBASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00588Q9Y4M8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00588Q9Y4M8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00588Q9Y4M8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00588Q9Y4M8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC00588Q9Y4M8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms