Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 POM121L8P-201ENST00000417732 1281 ntBASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 POM121L9P-203ENST00000441984 1285 ntBASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 AC004898.1-201ENST00000451057 766 ntBASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 FTLP10-202ENST00000505798 471 ntBASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 PPY2P-201ENST00000582808 702 ntBASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 AC005695.3-201ENST00000614522 232 ntBASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.22■□□□□ 0.03
NCKAP1Q9Y2A7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 AL136379.1-201ENST00000623471 2642 ntBASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 AL023775.1-201ENST00000454907 1746 ntBASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 AC104457.1-201ENST00000401024 814 ntBASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCKAP1Q9Y2A7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1Q9Y2A7 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.21■□□□□ 0.02
NCKAP1Q9Y2A7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.21■□□□□ 0.02
NCKAP1Q9Y2A7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1Q9Y2A7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCKAP1Q9Y2A7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NCKAP1Q9Y2A7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
NCKAP1Q9Y2A7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
NCKAP1Q9Y2A7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 POM121L10P-201ENST00000436994 1285 ntBASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.2■□□□□ 0.02
NCKAP1Q9Y2A7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms