Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 AC011247.3-201ENST00000603297 438 ntBASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.15■□□□□ 0.5
ZC3H4Q9UPT8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ZC3H4Q9UPT8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ZC3H4Q9UPT8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZC3H4Q9UPT8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 KRT18P9-201ENST00000604826 1300 ntBASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 HIST2H2BA-201ENST00000412169 381 ntBASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 EIF5AP2-201ENST00000585668 1047 ntBASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 SIGLEC18P-201ENST00000602271 909 ntBASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 LINC00431-202ENST00000636375 159 ntBASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H4Q9UPT8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 LINC01815-202ENST00000641468 1409 ntBASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 ORAOV1P1-201ENST00000503108 395 ntBASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 AC026434.2-201ENST00000506094 1078 ntBASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 FAM86KP-201ENST00000509817 987 ntBASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 AC005962.1-201ENST00000584100 773 ntBASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 AC107464.3-201ENST00000609172 737 ntBASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 AP001184.1-201ENST00000637936 376 ntBASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms