Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 AC012441.2-201ENST00000444843 739 ntBASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 KLF2P1-201ENST00000447438 1042 ntBASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 FTLP1-201ENST00000449155 526 ntBASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 AC009779.1-201ENST00000551138 283 ntBASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 SPCS2P2-201ENST00000603270 608 ntBASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 AL353770.1-201ENST00000614915 403 ntBASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2IRD1Q9UHL9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GTF2IRD1Q9UHL9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.52■□□□□ 0.23
GTF2IRD1Q9UHL9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.52■□□□□ 0.23
GTF2IRD1Q9UHL9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
GTF2IRD1Q9UHL9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2IRD1Q9UHL9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.52■□□□□ 0.23
GTF2IRD1Q9UHL9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2IRD1Q9UHL9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.52■□□□□ 0.23
GTF2IRD1Q9UHL9 LILRP1-201ENST00000444199 1370 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 AL008718.2-201ENST00000609206 1313 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 AC022532.1-201ENST00000624563 1728 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 AC020658.6-201ENST00000623564 1870 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 ISCA2P1-201ENST00000425548 448 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 RCC2P8-201ENST00000502779 1035 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 AC103988.2-201ENST00000561804 725 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 AC020922.3-201ENST00000595064 547 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 AL353726.2-201ENST00000623259 884 ntBASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2IRD1Q9UHL9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 AC003102.2-201ENST00000589195 1469 ntBASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 PDIA3P2-201ENST00000428073 158 ntBASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 AL353637.1-201ENST00000451571 732 ntBASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 AC234782.1-201ENST00000451950 919 ntBASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.5■□□□□ 0.23
GTF2IRD1Q9UHL9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms