Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 GHSR-202ENST00000427970 912 ntBASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 AP005018.1-201ENST00000525475 301 ntBASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 AP001063.1-201ENST00000568332 529 ntBASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 SAMD11P1-201ENST00000571429 661 ntBASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 AC148477.4-201ENST00000613430 1793 ntBASIC13.66□□□□□ -0.22
PARPBPQ9NWS1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 AC067750.1-201ENST00000608826 6545 ntBASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 C18orf15-201ENST00000623680 2534 ntBASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 PPT1-215ENST00000641471 2368 ntBASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 KRT17P7-201ENST00000451704 1104 ntBASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 AC005225.4-201ENST00000557330 545 ntBASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 WASH4P-201ENST00000564273 1246 ntBASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms