Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 REXO1L5P-201ENST00000622260 2098 ntBASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 FAM86MP-201ENST00000340703 885 ntBASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 RNU1-114P-201ENST00000365297 166 ntBASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 KRT223P-202ENST00000449164 1292 ntBASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 AL512343.1-201ENST00000605837 169 ntBASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 AC067930.6-201ENST00000623257 4947 ntBASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 RN7SL832P-201ENST00000607781 1756 ntBASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 MSTO2P-201ENST00000314835 1709 ntBASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 ENPP7P5-201ENST00000541031 1031 ntBASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 AC010319.3-201ENST00000597028 470 ntBASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 AC068587.10-201ENST00000641210 219 ntBASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUEDC1Q9NWM3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms