Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AC113367.3-201ENST00000508316 1912 ntBASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AC004461.2-201ENST00000629517 803 ntBASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 AC087499.5-201ENST00000452760 1342 ntBASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AP000347.1-202ENST00000435868 847 ntBASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AC069120.2-201ENST00000524091 540 ntBASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 SAMD11P1-201ENST00000571429 661 ntBASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AC027612.4-201ENST00000605371 583 ntBASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 TUBB3P1-201ENST00000405796 1332 ntBASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 AC097359.2-201ENST00000604992 2389 ntBASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.09□□□□□ -0.15
POLR2J3Q9H1A7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms