Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AC006504.5-208ENST00000588784 2401 ntBASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 SNHG9-202ENST00000564014 471 ntBASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 LINC01115-203ENST00000606068 577 ntBASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AL138828.2-201ENST00000615812 383 ntBASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 AC004461.2-201ENST00000629517 803 ntBASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 AC087499.5-201ENST00000452760 1342 ntBASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J2Q9GZM3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms