Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 AC036164.1-201ENST00000570544 333 ntBASIC14.03□□□□□ -0.16
TRIM2Q9C040 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 AC239800.4-201ENST00000603712 296 ntBASIC14.03□□□□□ -0.16
TRIM2Q9C040 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM2Q9C040 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRIM2Q9C040 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
TRIM2Q9C040 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.02□□□□□ -0.16
TRIM2Q9C040 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.02□□□□□ -0.16
TRIM2Q9C040 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRIM2Q9C040 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM2Q9C040 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 RARRES2P5-201ENST00000564013 466 ntBASIC14.02□□□□□ -0.17
TRIM2Q9C040 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 AL391069.4-201ENST00000609583 481 ntBASIC14.02□□□□□ -0.17
TRIM2Q9C040 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms