Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 AL645937.2-201ENST00000396808 931 ntBASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 BASP1P1-201ENST00000430708 665 ntBASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 AC026410.3-201ENST00000514280 936 ntBASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 RNA5SP421-201ENST00000516864 134 ntBASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 AC027796.2-201ENST00000575326 344 ntBASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBNA1BP2Q99848 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 AC023090.2-201ENST00000625182 2110 ntBASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 AL512638.1-201ENST00000457493 794 ntBASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 AC004840.1-201ENST00000636359 365 ntBASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 AL138799.1-201ENST00000448213 1675 ntBASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
EBNA1BP2Q99848 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
EBNA1BP2Q99848 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms