Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 AC134312.5-201ENST00000568031 1313 ntBASIC21.03■□□□□ 0.96
CCDC7Q96M83 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 AC244669.2-201ENST00000612320 853 ntBASIC21.03■□□□□ 0.96
CCDC7Q96M83 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 AC007292.2-201ENST00000593524 1812 ntBASIC21.03■□□□□ 0.96
CCDC7Q96M83 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC7Q96M83 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 AC140479.7-201ENST00000636301 2332 ntBASIC21.03■□□□□ 0.96
CCDC7Q96M83 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC7Q96M83 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC7Q96M83 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC7Q96M83 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC7Q96M83 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC7Q96M83 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC7Q96M83 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC7Q96M83 AC026954.1-201ENST00000429771 1293 ntBASIC21.02■□□□□ 0.96
CCDC7Q96M83 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC7Q96M83 GOLGA2P4-201ENST00000441462 777 ntBASIC21.02■□□□□ 0.96
CCDC7Q96M83 RPL13AP20-201ENST00000459725 609 ntBASIC21.02■□□□□ 0.96
CCDC7Q96M83 MIR3615-201ENST00000581999 87 ntBASIC21.02■□□□□ 0.96
CCDC7Q96M83 AL603764.1-201ENST00000636452 321 ntBASIC21.02■□□□□ 0.96
CCDC7Q96M83 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC7Q96M83 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC7Q96M83 AL138709.1-201ENST00000614840 1693 ntBASIC21.02■□□□□ 0.96
CCDC7Q96M83 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC7Q96M83 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC7Q96M83 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC7Q96M83 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC7Q96M83 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.02■□□□□ 0.95
CCDC7Q96M83 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC7Q96M83 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 AC008687.7-202ENST00000637404 953 ntBASIC21.01■□□□□ 0.95
CCDC7Q96M83 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC7Q96M83 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC7Q96M83 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC7Q96M83 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC21■□□□□ 0.95
CCDC7Q96M83 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC7Q96M83 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC7Q96M83 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC21■□□□□ 0.95
CCDC7Q96M83 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC7Q96M83 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CCDC7Q96M83 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21■□□□□ 0.95
CCDC7Q96M83 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC21■□□□□ 0.95
CCDC7Q96M83 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC7Q96M83 C2orf69P2-201ENST00000562032 1123 ntBASIC21■□□□□ 0.95
CCDC7Q96M83 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21■□□□□ 0.95
CCDC7Q96M83 RN7SL560P-201ENST00000577943 264 ntBASIC21■□□□□ 0.95
CCDC7Q96M83 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC21■□□□□ 0.95
CCDC7Q96M83 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CCDC7Q96M83 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC7Q96M83 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC21■□□□□ 0.95
CCDC7Q96M83 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC7Q96M83 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms