Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 GAPDHP40-201ENST00000505218 1006 ntBASIC11.92□□□□□ -0.5
RAX2Q96IS3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.92□□□□□ -0.5
RAX2Q96IS3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAX2Q96IS3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 ACKR1-201ENST00000368121 1240 ntBASIC11.91□□□□□ -0.5
RAX2Q96IS3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 AC092933.1-201ENST00000393644 945 ntBASIC11.91□□□□□ -0.5
RAX2Q96IS3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAX2Q96IS3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 AC106760.1-201ENST00000508690 800 ntBASIC11.91□□□□□ -0.5
RAX2Q96IS3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.91□□□□□ -0.5
RAX2Q96IS3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms