Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 TPT1P11-201ENST00000458482 498 ntBASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 AC022137.2-201ENST00000503482 481 ntBASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 AC140912.1-201ENST00000577171 1054 ntBASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 AC008494.3-201ENST00000606615 944 ntBASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 AC055811.4-201ENST00000624039 1754 ntBASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 AC236430.1-201ENST00000402231 743 ntBASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 TLE1P1-201ENST00000422965 589 ntBASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 TP53TG3HP-202ENST00000569755 579 ntBASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 WFDC1-204ENST00000613603 549 ntBASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM5Q96HC4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 GRK6P1-201ENST00000400595 1711 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 AC015802.1-201ENST00000588104 1449 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms