Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 PCDH8P1-201ENST00000428983 2773 ntBASIC17.44■□□□□ 0.38
CDCA5Q96FF9 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 BAK1P1-201ENST00000317045 636 ntBASIC17.44■□□□□ 0.38
CDCA5Q96FF9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 AL357563.1-201ENST00000404728 395 ntBASIC17.44■□□□□ 0.38
CDCA5Q96FF9 KRT18P36-201ENST00000411618 1276 ntBASIC17.44■□□□□ 0.38
CDCA5Q96FF9 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA5Q96FF9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 AC114947.1-202ENST00000514136 344 ntBASIC17.43■□□□□ 0.38
CDCA5Q96FF9 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 RN7SL470P-201ENST00000583069 259 ntBASIC17.43■□□□□ 0.38
CDCA5Q96FF9 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 AC005041.3-201ENST00000606287 649 ntBASIC17.43■□□□□ 0.38
CDCA5Q96FF9 AC024909.3-201ENST00000611513 2257 ntBASIC17.43■□□□□ 0.38
CDCA5Q96FF9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA5Q96FF9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 PCDHA14-201ENST00000506751 2298 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 AC092638.2-201ENST00000441105 947 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 AL354861.1-201ENST00000445213 355 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 CR383656.3-201ENST00000551315 183 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 DNM1P51-201ENST00000558149 522 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 RN7SL596P-201ENST00000582123 288 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA5Q96FF9 AC006158.1-201ENST00000610661 249 ntBASIC17.42■□□□□ 0.38
CDCA5Q96FF9 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms