Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 MIR4745-201ENST00000577608 62 ntBASIC15.68■□□□□ 0.1
HDAC11Q96DB2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 CHCHD2P3-201ENST00000603038 451 ntBASIC15.68■□□□□ 0.1
HDAC11Q96DB2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.68■□□□□ 0.1
HDAC11Q96DB2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 AL158070.2-201ENST00000623713 1621 ntBASIC15.68■□□□□ 0.1
HDAC11Q96DB2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC11Q96DB2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 C1QBPP1-201ENST00000400117 770 ntBASIC15.67■□□□□ 0.1
HDAC11Q96DB2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 AC099063.4-201ENST00000641099 1602 ntBASIC15.67■□□□□ 0.1
HDAC11Q96DB2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 KRT8P22-201ENST00000562317 1415 ntBASIC15.67■□□□□ 0.1
HDAC11Q96DB2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC11Q96DB2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 LILRP1-201ENST00000444199 1370 ntBASIC15.66■□□□□ 0.1
HDAC11Q96DB2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 FGD5P1-202ENST00000614866 2498 ntBASIC15.66■□□□□ 0.1
HDAC11Q96DB2 CICP24-201ENST00000605464 2705 ntBASIC15.66■□□□□ 0.1
HDAC11Q96DB2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 PIN1P1-201ENST00000412108 996 ntBASIC15.66■□□□□ 0.1
HDAC11Q96DB2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.66■□□□□ 0.1
HDAC11Q96DB2 NUS1P3-201ENST00000423502 862 ntBASIC15.66■□□□□ 0.1
HDAC11Q96DB2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 AL359711.2-201ENST00000563105 872 ntBASIC15.66■□□□□ 0.1
HDAC11Q96DB2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC11Q96DB2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms