Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FAM45BP-202ENST00000592932 1624 ntBASIC13.35□□□□□ -0.27
TMEM54Q969K7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 AC018529.2-202ENST00000611482 3087 ntBASIC13.34□□□□□ -0.27
TMEM54Q969K7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 AC145423.3-201ENST00000615987 467 ntBASIC13.34□□□□□ -0.27
TMEM54Q969K7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM54Q969K7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM54Q969K7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TMEM54Q969K7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 INE1-201ENST00000456273 945 ntBASIC13.33□□□□□ -0.28
TMEM54Q969K7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 AP001889.1-201ENST00000525414 633 ntBASIC13.33□□□□□ -0.28
TMEM54Q969K7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 AC015936.2-201ENST00000593177 259 ntBASIC13.33□□□□□ -0.28
TMEM54Q969K7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 AC106881.1-201ENST00000605849 3329 ntBASIC13.33□□□□□ -0.28
TMEM54Q969K7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 AC232323.1-201ENST00000540724 2099 ntBASIC13.33□□□□□ -0.28
TMEM54Q969K7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM54Q969K7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM54Q969K7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms