Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS3Q969F9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS3Q969F9 AC092364.2-202ENST00000597012 1073 ntBASIC16.82■□□□□ 0.28
HPS3Q969F9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.82■□□□□ 0.28
HPS3Q969F9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HPS3Q969F9 CU634019.7-201ENST00000624153 1185 ntBASIC16.82■□□□□ 0.28
HPS3Q969F9 FP236241.2-201ENST00000624906 1185 ntBASIC16.82■□□□□ 0.28
HPS3Q969F9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS3Q969F9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS3Q969F9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS3Q969F9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS3Q969F9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS3Q969F9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS3Q969F9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS3Q969F9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS3Q969F9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HPS3Q969F9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 AC099063.4-201ENST00000641099 1602 ntBASIC16.81■□□□□ 0.28
HPS3Q969F9 AC117489.1-201ENST00000625169 3217 ntBASIC16.81■□□□□ 0.28
HPS3Q969F9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS3Q969F9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
HPS3Q969F9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HPS3Q969F9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS3Q969F9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HPS3Q969F9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS3Q969F9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.81■□□□□ 0.28
HPS3Q969F9 KLF2P2-201ENST00000416807 1039 ntBASIC16.81■□□□□ 0.28
HPS3Q969F9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS3Q969F9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS3Q969F9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.81■□□□□ 0.28
HPS3Q969F9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.81■□□□□ 0.28
HPS3Q969F9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS3Q969F9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS3Q969F9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HPS3Q969F9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS3Q969F9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HPS3Q969F9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS3Q969F9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS3Q969F9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.8■□□□□ 0.28
HPS3Q969F9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 AC026748.1-201ENST00000624349 3251 ntBASIC16.8■□□□□ 0.28
HPS3Q969F9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.8■□□□□ 0.28
HPS3Q969F9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
HPS3Q969F9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HPS3Q969F9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HPS3Q969F9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.8■□□□□ 0.28
HPS3Q969F9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.8■□□□□ 0.28
HPS3Q969F9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 EIF3FP3-201ENST00000434851 1086 ntBASIC16.8■□□□□ 0.28
HPS3Q969F9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS3Q969F9 AC093433.1-201ENST00000458048 571 ntBASIC16.8■□□□□ 0.28
HPS3Q969F9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS3Q969F9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS3Q969F9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.8■□□□□ 0.28
HPS3Q969F9 AL033527.5-201ENST00000641382 801 ntBASIC16.8■□□□□ 0.28
HPS3Q969F9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.8■□□□□ 0.28
HPS3Q969F9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
HPS3Q969F9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS3Q969F9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS3Q969F9 KRT8P14-201ENST00000414254 1442 ntBASIC16.79■□□□□ 0.28
HPS3Q969F9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HPS3Q969F9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.79■□□□□ 0.28
HPS3Q969F9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS3Q969F9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS3Q969F9 AP001267.2-201ENST00000532619 2086 ntBASIC16.79■□□□□ 0.28
HPS3Q969F9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.79■□□□□ 0.28
HPS3Q969F9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.79■□□□□ 0.28
HPS3Q969F9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS3Q969F9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms