Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CNOT9Q92600 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 MEP1AP4-201ENST00000423244 1087 ntBASIC14.05□□□□□ -0.16
CNOT9Q92600 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.05□□□□□ -0.16
CNOT9Q92600 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.05□□□□□ -0.16
CNOT9Q92600 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.05□□□□□ -0.16
CNOT9Q92600 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.05□□□□□ -0.16
CNOT9Q92600 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.05□□□□□ -0.16
CNOT9Q92600 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CNOT9Q92600 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.05□□□□□ -0.16
CNOT9Q92600 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.05□□□□□ -0.16
CNOT9Q92600 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 AL360270.3-201ENST00000609118 1348 ntBASIC14.05□□□□□ -0.16
CNOT9Q92600 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CNOT9Q92600 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.05□□□□□ -0.16
CNOT9Q92600 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.05□□□□□ -0.16
CNOT9Q92600 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CNOT9Q92600 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CNOT9Q92600 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT9Q92600 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT9Q92600 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.04□□□□□ -0.16
CNOT9Q92600 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CNOT9Q92600 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT9Q92600 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 AL138799.1-201ENST00000448213 1675 ntBASIC14.04□□□□□ -0.16
CNOT9Q92600 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CNOT9Q92600 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.04□□□□□ -0.16
CNOT9Q92600 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT9Q92600 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CNOT9Q92600 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT9Q92600 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT9Q92600 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CNOT9Q92600 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 AL353779.1-201ENST00000434793 351 ntBASIC14.04□□□□□ -0.16
CNOT9Q92600 SPTLC1P1-201ENST00000447199 261 ntBASIC14.04□□□□□ -0.16
CNOT9Q92600 SERBP1P5-201ENST00000510079 1181 ntBASIC14.04□□□□□ -0.16
CNOT9Q92600 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.04□□□□□ -0.16
CNOT9Q92600 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.04□□□□□ -0.16
CNOT9Q92600 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT9Q92600 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.04□□□□□ -0.16
CNOT9Q92600 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CNOT9Q92600 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT9Q92600 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT9Q92600 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT9Q92600 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 SLC7A15P-201ENST00000424028 1363 ntBASIC14.04□□□□□ -0.16
CNOT9Q92600 LILRP1-201ENST00000444199 1370 ntBASIC14.04□□□□□ -0.16
CNOT9Q92600 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT9Q92600 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT9Q92600 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT9Q92600 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms