Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 AC079178.1-201ENST00000420915 656 ntBASIC13.58□□□□□ -0.24
RNF138Q8WVD3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 FAM21FP-201ENST00000426241 1131 ntBASIC13.58□□□□□ -0.24
RNF138Q8WVD3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 FAM86HP-204ENST00000513466 959 ntBASIC13.58□□□□□ -0.24
RNF138Q8WVD3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 AC103988.2-201ENST00000561804 725 ntBASIC13.58□□□□□ -0.24
RNF138Q8WVD3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 MIR4783-201ENST00000580343 82 ntBASIC13.58□□□□□ -0.24
RNF138Q8WVD3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 KRT8P4-201ENST00000509735 1454 ntBASIC13.58□□□□□ -0.24
RNF138Q8WVD3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF138Q8WVD3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 AL008721.1-201ENST00000609964 604 ntBASIC13.57□□□□□ -0.24
RNF138Q8WVD3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RNF138Q8WVD3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 HSPB1P2-201ENST00000448722 546 ntBASIC13.56□□□□□ -0.24
RNF138Q8WVD3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 AC100850.1-201ENST00000506768 649 ntBASIC13.56□□□□□ -0.24
RNF138Q8WVD3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 AC009955.4-201ENST00000597192 544 ntBASIC13.56□□□□□ -0.24
RNF138Q8WVD3 AC244157.2-201ENST00000616239 1006 ntBASIC13.56□□□□□ -0.24
RNF138Q8WVD3 AC009542.2-202ENST00000619004 1067 ntBASIC13.56□□□□□ -0.24
RNF138Q8WVD3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 AL033527.4-201ENST00000641026 673 ntBASIC13.56□□□□□ -0.24
RNF138Q8WVD3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms