Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 KRT8P44-201ENST00000441609 1350 ntBASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 AC139749.1-202ENST00000617529 3139 ntBASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 KRT223P-202ENST00000449164 1292 ntBASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 KLF2P4-201ENST00000451959 1225 ntBASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 AC004066.1-201ENST00000502488 802 ntBASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 AC119751.2-201ENST00000504529 210 ntBASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.52■□□□□ 0.08
GRIN3AQ8TCU5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 C18orf15-201ENST00000623680 2534 ntBASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.52■□□□□ 0.07
GRIN3AQ8TCU5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 AL359258.3-201ENST00000622910 2331 ntBASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 KRT8P35-201ENST00000483942 1338 ntBASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 AC007551.1-201ENST00000457394 519 ntBASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 AC244669.2-201ENST00000612320 853 ntBASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 MIR6752-201ENST00000618442 71 ntBASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 COX11-210ENST00000639671 696 ntBASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GRIN3AQ8TCU5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms