Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCC2Q8TAQ2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMARCC2Q8TAQ2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMARCC2Q8TAQ2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMARCC2Q8TAQ2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SMARCC2Q8TAQ2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.77■□□□□ 0.43
SMARCC2Q8TAQ2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.77■□□□□ 0.43
SMARCC2Q8TAQ2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMARCC2Q8TAQ2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 GK-202ENST00000378941 458 ntTSL 3 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 TMEM14DP-201ENST00000422205 345 ntBASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.76■□□□□ 0.43
SMARCC2Q8TAQ2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AL136379.1-201ENST00000623471 2642 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AC026748.1-201ENST00000624349 3251 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AL645937.2-201ENST00000396808 931 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 U91328.1-201ENST00000437528 223 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 TDH-203ENST00000531764 1110 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AC015936.2-201ENST00000593177 259 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AC093813.1-201ENST00000605066 256 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 PRSS30P-206ENST00000641773 873 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AC005089.1-201ENST00000619486 2241 ntBASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.75■□□□□ 0.43
SMARCC2Q8TAQ2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms