Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 RNU1-114P-201ENST00000365297 166 ntBASIC16.02■□□□□ 0.16
TTC16Q8NEE8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 ACTBP11-201ENST00000436287 1126 ntBASIC16.02■□□□□ 0.16
TTC16Q8NEE8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC16Q8NEE8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 LRRC59-203ENST00000576448 1531 ntBASIC16.02■□□□□ 0.15
TTC16Q8NEE8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC16Q8NEE8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 MIR1908-201ENST00000410394 80 ntBASIC16.01■□□□□ 0.15
TTC16Q8NEE8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 AL355994.2-201ENST00000447882 704 ntBASIC16.01■□□□□ 0.15
TTC16Q8NEE8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 FO681548.1-201ENST00000455617 1132 ntBASIC16.01■□□□□ 0.15
TTC16Q8NEE8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 AP005019.2-201ENST00000615104 511 ntBASIC16.01■□□□□ 0.15
TTC16Q8NEE8 RHOXF1P1-202ENST00000635473 501 ntBASIC16.01■□□□□ 0.15
TTC16Q8NEE8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC16Q8NEE8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms