Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 ELK1P1-201ENST00000485699 580 ntBASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 AC107373.2-201ENST00000607735 490 ntBASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 AC099568.2-201ENST00000609194 695 ntBASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 AL157414.3-201ENST00000624276 1954 ntBASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SIMC1Q8NDZ2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 MEP1AP4-201ENST00000423244 1087 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 GHSR-202ENST00000427970 912 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 MYCLP2-201ENST00000449268 967 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AC026410.3-201ENST00000514280 936 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AL359711.2-201ENST00000563105 872 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 RRP7BP-205ENST00000566851 833 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AC093726.1-201ENST00000608064 963 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 AL358472.5-202ENST00000641448 1267 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SIMC1Q8NDZ2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 PIN1P1-201ENST00000412108 996 ntBASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 AL353779.1-201ENST00000434793 351 ntBASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms