Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ARHGEF39Q8N4T4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AC003102.2-201ENST00000589195 1469 ntBASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 FAM8A4P-201ENST00000435433 1213 ntBASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AC244107.1-201ENST00000442033 332 ntBASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 CNN2P10-201ENST00000443067 918 ntBASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AC023310.1-201ENST00000554836 735 ntBASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.26□□□□□ -0.13
ARHGEF39Q8N4T4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 RN7SL713P-201ENST00000582127 302 ntBASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 OR10B1P-201ENST00000601666 907 ntBASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 AJ011931.1-201ENST00000618749 2492 ntBASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ARHGEF39Q8N4T4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms