Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TPT1P11-201ENST00000458482 498 ntBASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM42Q8IWZ5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 AC055811.4-201ENST00000624039 1754 ntBASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 REXO1L4P-201ENST00000605109 1937 ntBASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 HTR5BP-201ENST00000430851 1154 ntBASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 ALG1L5P-201ENST00000482043 771 ntBASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 KRT8P23-201ENST00000560090 1207 ntBASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 AC015910.1-201ENST00000579400 975 ntBASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 AL691403.2-201ENST00000618460 490 ntBASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 AP001267.2-201ENST00000532619 2086 ntBASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM42Q8IWZ5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms