Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 HOMER2P2-201ENST00000451621 847 ntBASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AL590640.2-201ENST00000457038 527 ntBASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AL021578.1-201ENST00000613646 709 ntBASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 RETN-203ENST00000629642 400 ntTSL 5 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AL138799.1-201ENST00000448213 1675 ntBASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AL138709.1-201ENST00000614840 1693 ntBASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SBSPONQ8IVN8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SBSPONQ8IVN8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms