Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 CD8B2-202ENST00000417670 633 ntBASIC16.15■□□□□ 0.18
RNF135Q8IUD6 NKAIN1P1-201ENST00000435754 582 ntBASIC16.15■□□□□ 0.18
RNF135Q8IUD6 AC114501.1-201ENST00000445949 172 ntBASIC16.15■□□□□ 0.18
RNF135Q8IUD6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 HSPB1P2-201ENST00000448722 546 ntBASIC16.15■□□□□ 0.18
RNF135Q8IUD6 EEF1DP6-201ENST00000449232 372 ntBASIC16.15■□□□□ 0.18
RNF135Q8IUD6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.14■□□□□ 0.18
RNF135Q8IUD6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
RNF135Q8IUD6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 Z97180.1-201ENST00000445173 988 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 PHKG1P2-201ENST00000457537 863 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AC044849.1-201ENST00000519737 1188 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 PRKXP1-201ENST00000561423 1122 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AL450472.2-201ENST00000603663 1156 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AC107373.2-201ENST00000607735 490 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AC006480.2-201ENST00000609770 1337 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AC007326.2-201ENST00000624224 7579 ntBASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF135Q8IUD6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms