Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC023024.2-201ENST00000623561 1993 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 Z69890.1-201ENST00000382990 339 ntBASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AL807761.2-201ENST00000422849 729 ntBASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AC084752.1-201ENST00000509766 622 ntBASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 RPS5-204ENST00000598098 536 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 CD164-210ENST00000512821 964 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AL451007.2-201ENST00000632004 563 ntBASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AC008825.2-201ENST00000603374 718 ntBASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 DKFZP434H168-201ENST00000567381 1905 ntBASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13BQ7Z7G8 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 TP53-221ENST00000615910 1149 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13BQ7Z7G8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms