Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 PUDPP3-201ENST00000445368 636 ntBASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 AC005324.6-201ENST00000587972 613 ntBASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 AC090164.2-201ENST00000611487 516 ntBASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 AC051619.9-201ENST00000623237 597 ntBASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 AL645728.2-202ENST00000641679 227 ntBASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
OTOP1Q7RTM1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 TBC1D3J-201ENST00000620719 1426 ntBASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 RPL7P35-201ENST00000446943 740 ntBASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 RPL18P13-201ENST00000478088 569 ntBASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 AC090857.1-201ENST00000527400 390 ntBASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 AL136295.7-201ENST00000619226 1200 ntBASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTOP1Q7RTM1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 RN7SKP214-201ENST00000364208 315 ntBASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 AL627231.1-201ENST00000394467 1125 ntBASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 EIF3FP3-201ENST00000434851 1086 ntBASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 AC073150.1-201ENST00000450406 1084 ntBASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 AL160314.3-201ENST00000556041 767 ntBASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 DNM1P30-201ENST00000563586 452 ntBASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OTOP1Q7RTM1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
OTOP1Q7RTM1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
OTOP1Q7RTM1 KRT8P14-201ENST00000414254 1442 ntBASIC17.39■□□□□ 0.38
OTOP1Q7RTM1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 TMBIM7P-203ENST00000641617 1718 ntBASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AC112693.3-201ENST00000624819 1983 ntBASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 RPS9P1-201ENST00000419943 583 ntBASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 GHSR-202ENST00000427970 912 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms