Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC091607.1-201ENST00000490318 1060 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 MIR5100-201ENST00000579544 119 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 MIR4313-201ENST00000580760 101 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AP005901.3-202ENST00000581653 237 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 BNIP3P18-201ENST00000593976 575 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AC021097.1-201ENST00000607902 574 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 KRT8P22-201ENST00000562317 1415 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AC073548.1-201ENST00000624088 1882 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 TPT1P11-201ENST00000458482 498 ntBASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 SCARNA2-201ENST00000458748 420 ntBASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 MIR4321-201ENST00000592276 80 ntBASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP4Q6PIL6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms