Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC087499.5-201ENST00000452760 1342 ntBASIC15.58■□□□□ 0.08
CASC4Q6P4E1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.57■□□□□ 0.08
CASC4Q6P4E1 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 AC117489.1-201ENST00000625169 3217 ntBASIC15.56■□□□□ 0.08
CASC4Q6P4E1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 AC097493.3-201ENST00000509725 367 ntBASIC15.56■□□□□ 0.08
CASC4Q6P4E1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 AC004461.2-201ENST00000629517 803 ntBASIC15.56■□□□□ 0.08
CASC4Q6P4E1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 AL645728.2-202ENST00000641679 227 ntBASIC15.56■□□□□ 0.08
CASC4Q6P4E1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 AC100757.3-201ENST00000622361 1406 ntBASIC15.56■□□□□ 0.08
CASC4Q6P4E1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASC4Q6P4E1 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms