Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 AC097359.2-201ENST00000604992 2389 ntBASIC14.19□□□□□ -0.14
REEP3Q6NUK4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 BTBD7P1-201ENST00000447253 1453 ntBASIC14.19□□□□□ -0.14
REEP3Q6NUK4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 GAPDHP40-201ENST00000505218 1006 ntBASIC14.19□□□□□ -0.14
REEP3Q6NUK4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
REEP3Q6NUK4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 AL157414.3-201ENST00000624276 1954 ntBASIC14.18□□□□□ -0.14
REEP3Q6NUK4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 FAM86GP-201ENST00000448322 971 ntBASIC14.18□□□□□ -0.14
REEP3Q6NUK4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.18□□□□□ -0.14
REEP3Q6NUK4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms