Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 MIR1199-201ENST00000621445 119 ntBASIC14.37□□□□□ -0.11
LPCAT4Q643R3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 RPS2P1-201ENST00000434010 821 ntBASIC14.36□□□□□ -0.11
LPCAT4Q643R3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 SPTSSB-204ENST00000617024 1292 ntBASIC14.36□□□□□ -0.11
LPCAT4Q643R3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.36□□□□□ -0.11
LPCAT4Q643R3 AL365181.3-201ENST00000605886 3222 ntBASIC14.36□□□□□ -0.11
LPCAT4Q643R3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 BEND3P3-201ENST00000611030 2440 ntBASIC14.35□□□□□ -0.11
LPCAT4Q643R3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 AC111170.3-201ENST00000624282 2464 ntBASIC14.35□□□□□ -0.11
LPCAT4Q643R3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.35□□□□□ -0.11
LPCAT4Q643R3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 AL356488.2-201ENST00000602755 427 ntBASIC14.35□□□□□ -0.11
LPCAT4Q643R3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms