Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 FAM197Y6-201ENST00000420524 766 ntBASIC12.89□□□□□ -0.35
LRRK2Q5S007 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 MIR6125-201ENST00000618986 96 ntBASIC12.89□□□□□ -0.35
LRRK2Q5S007 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 AP000769.1-203ENST00000637245 208 ntBASIC12.89□□□□□ -0.35
LRRK2Q5S007 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 AL360270.3-201ENST00000609118 1348 ntBASIC12.89□□□□□ -0.35
LRRK2Q5S007 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRK2Q5S007 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRK2Q5S007 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 FAU-201ENST00000279259 461 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 AC068831.5-201ENST00000557387 328 ntBASIC12.88□□□□□ -0.35
LRRK2Q5S007 HERC2P11-201ENST00000562845 725 ntBASIC12.88□□□□□ -0.35
LRRK2Q5S007 AC100756.2-201ENST00000569537 736 ntBASIC12.88□□□□□ -0.35
LRRK2Q5S007 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRK2Q5S007 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LRRK2Q5S007 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms