Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 PDIA3P1-201ENST00000471856 1510 ntBASIC19.65■□□□□ 0.74
CCDC27Q2M243 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC27Q2M243 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC27Q2M243 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC27Q2M243 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
CCDC27Q2M243 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 AL391280.1-201ENST00000506969 1062 ntBASIC19.64■□□□□ 0.73
CCDC27Q2M243 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 AC011840.2-201ENST00000563063 1520 ntBASIC19.64■□□□□ 0.73
CCDC27Q2M243 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 SALL4P5-201ENST00000419001 1760 ntBASIC19.64■□□□□ 0.73
CCDC27Q2M243 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 INE2-201ENST00000630399 1874 ntBASIC19.64■□□□□ 0.73
CCDC27Q2M243 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC27Q2M243 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC27Q2M243 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 MTHFR-210ENST00000641407 2387 ntBASIC19.63■□□□□ 0.73
CCDC27Q2M243 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 GCOM2-201ENST00000509133 1104 ntBASIC19.63■□□□□ 0.73
CCDC27Q2M243 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 C2orf69P2-201ENST00000562032 1123 ntBASIC19.63■□□□□ 0.73
CCDC27Q2M243 BX088702.1-201ENST00000610784 235 ntBASIC19.63■□□□□ 0.73
CCDC27Q2M243 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC27Q2M243 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC27Q2M243 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 AC099063.4-201ENST00000641099 1602 ntBASIC19.62■□□□□ 0.73
CCDC27Q2M243 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms