Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AL807761.2-201ENST00000422849 729 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AQP7P5-201ENST00000428759 1049 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AC078875.1-201ENST00000431907 724 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AL645933.1-201ENST00000440087 609 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AQP7P4-201ENST00000447083 1042 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AQP7P2-201ENST00000453967 1041 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 RN7SL81P-201ENST00000493781 261 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 PHBP15-201ENST00000574228 665 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AC084781.1-201ENST00000613737 656 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AQP7P3-201ENST00000624547 1041 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 KRT18P9-201ENST00000604826 1300 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 AC006449.5-201ENST00000610658 2098 ntBASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 AC132872.4-202ENST00000622924 2756 ntBASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 AC023141.7-201ENST00000430646 407 ntBASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 KLF2P1-201ENST00000447438 1042 ntBASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 AP005212.2-201ENST00000584979 510 ntBASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 HMGB1P24-201ENST00000611897 328 ntBASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 ENPP7P8-202ENST00000527856 1345 ntBASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
RSPO4Q2I0M5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO4Q2I0M5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms