Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 AC013726.1-201ENST00000563747 2285 ntBASIC13.92□□□□□ -0.18
LTBQ06643 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LTBQ06643 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.92□□□□□ -0.18
LTBQ06643 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
LTBQ06643 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.92□□□□□ -0.18
LTBQ06643 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.92□□□□□ -0.18
LTBQ06643 API5-211ENST00000534695 560 ntTSL 5 BASIC13.92□□□□□ -0.18
LTBQ06643 AC092552.1-201ENST00000547243 906 ntBASIC13.92□□□□□ -0.18
LTBQ06643 AC106886.1-201ENST00000568660 600 ntBASIC13.92□□□□□ -0.18
LTBQ06643 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LTBQ06643 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
LTBQ06643 AL033527.4-201ENST00000641026 673 ntBASIC13.92□□□□□ -0.18
LTBQ06643 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.92□□□□□ -0.18
LTBQ06643 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LTBQ06643 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.92□□□□□ -0.18
LTBQ06643 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 REXO1L4P-201ENST00000605109 1937 ntBASIC13.92□□□□□ -0.18
LTBQ06643 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
LTBQ06643 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 AC026748.1-201ENST00000624349 3251 ntBASIC13.91□□□□□ -0.18
LTBQ06643 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
LTBQ06643 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBQ06643 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LTBQ06643 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.91□□□□□ -0.18
LTBQ06643 FAM86MP-201ENST00000340703 885 ntBASIC13.91□□□□□ -0.18
LTBQ06643 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LTBQ06643 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 DGCR5-201ENST00000399539 862 ntBASIC13.91□□□□□ -0.18
LTBQ06643 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LTBQ06643 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 AC104794.3-201ENST00000566840 1248 ntBASIC13.91□□□□□ -0.18
LTBQ06643 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.91□□□□□ -0.18
LTBQ06643 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.91□□□□□ -0.18
LTBQ06643 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LTBQ06643 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBQ06643 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBQ06643 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBQ06643 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBQ06643 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBQ06643 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBQ06643 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBQ06643 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.9□□□□□ -0.18
LTBQ06643 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
LTBQ06643 REXO1L6P-201ENST00000603433 1515 ntBASIC13.9□□□□□ -0.18
LTBQ06643 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBQ06643 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBQ06643 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBQ06643 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBQ06643 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LTBQ06643 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBQ06643 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LTBQ06643 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LTBQ06643 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBQ06643 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms