Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AC104794.3-201ENST00000566840 1248 ntBASIC14.69□□□□□ -0.06
HMGCS1Q01581 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AC005498.2-205ENST00000593218 784 ntBASIC14.69□□□□□ -0.06
HMGCS1Q01581 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 AL355385.1-201ENST00000606123 409 ntBASIC14.68□□□□□ -0.06
HMGCS1Q01581 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HMGCS1Q01581 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCS1Q01581 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 MIR770-201ENST00000390219 98 ntBASIC14.67□□□□□ -0.06
HMGCS1Q01581 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms